Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2790 domain-containing protein | PviCFBP13507_09675 | Not Available | Negative | 2173650 - 2173916 | 9527.51 |
| acetate--coa ligase | PviCFBP13507_09680 | Not Available | Positive | 2174256 - 2176211 | 71614.2 |
| hypothetical protein | PviCFBP13507_09685 | Not Available | Positive | 2176376 - 2176837 | 17381.3 |
| abc transporter substrate-binding protein | PviCFBP13507_09690 | Not Available | Positive | 2177141 - 2177917 | 27994.7 |
| arginine abc transporter permease artq | PviCFBP13507_09695 | Not Available | Positive | 2178004 - 2178693 | 24915.3 |
| amino acid abc transporter permease | PviCFBP13507_09700 | Not Available | Positive | 2178690 - 2179388 | 26029.6 |
| peptidase m14 | PviCFBP13507_09705 | Not Available | Positive | 2179390 - 2180502 | 40519.5 |
| histidine/lysine/arginine/ornithine abc transporter atp-binding protein | PviCFBP13507_09710 | Not Available | Positive | 2180525 - 2181289 | 27907.0 |
| glxa family transcriptional regulator | PviCFBP13507_09715 | Not Available | Positive | 2181335 - 2182414 | 40105.1 |
| hypothetical protein | PviCFBP13507_09720 | Not Available | Negative | 2182490 - 2182675 | 6896.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
