Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| allantoinase puue | PviCFBP13507_09625 | Not Available | Negative | 2164596 - 2165525 | 35744.3 |
| hypothetical protein | PviCFBP13507_09630 | Not Available | Positive | 2165567 - 2166001 | 16333.7 |
| hydroxyisourate hydrolase | PviCFBP13507_09635 | Not Available | Positive | 2165919 - 2166272 | 12784.2 |
| gntr family transcriptional regulator | PviCFBP13507_09640 | Not Available | Positive | 2166410 - 2167162 | 27594.9 |
| mfs transporter | PviCFBP13507_09645 | Not Available | Negative | 2167170 - 2168381 | 41719.1 |
| hypothetical protein | PviCFBP13507_09650 | Not Available | Negative | 2168569 - 2168748 | 6302.53 |
| aromatic amino acid aminotransferase | PviCFBP13507_09655 | Not Available | Negative | 2169320 - 2170516 | 43643.2 |
| 4a-hydroxytetrahydrobiopterin dehydratase | PviCFBP13507_09660 | Not Available | Negative | 2170516 - 2170872 | 13360.9 |
| phenylalanine 4-monooxygenase | PviCFBP13507_09665 | Not Available | Negative | 2170912 - 2171709 | 30302.5 |
| sigma-54-dependent phenylalanine hydroxylase transcriptional regulator phhr | PviCFBP13507_09670 | Not Available | Positive | 2171983 - 2173542 | 57178.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
