Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase | PviCFBP13507_00800 | Not Available | Positive | 184025 - 184798 | 27848.9 |
| type vi secretion system tip protein vgrg | PviCFBP13507_00805 | Not Available | Negative | 184785 - 186755 | 74242.6 |
| yebc/pmpr family dna-binding regulatory protein | PviCFBP13507_00810 | Not Available | Positive | 187067 - 187771 | 25343.9 |
| protein kinase | PviCFBP13507_00815 | Not Available | Negative | 187793 - 189097 | 47900.7 |
| tetr/acrr family transcriptional regulator | PviCFBP13507_00820 | Not Available | Negative | 189175 - 189720 | 20010.0 |
| mfs transporter | PviCFBP13507_00825 | Not Available | Positive | 189827 - 191050 | 42356.0 |
| hypothetical protein | PviCFBP13507_00830 | Not Available | Negative | 191330 - 192466 | 42659.9 |
| duf4880 domain-containing protein | PviCFBP13507_00835 | Not Available | Negative | 192555 - 193097 | 20338.7 |
| lrp/asnc family transcriptional regulator | PviCFBP13507_00840 | Not Available | Negative | 193584 - 194051 | 17655.6 |
| indolepyruvate ferredoxin oxidoreductase family protein | PviCFBP13507_00845 | Not Available | Positive | 194238 - 197720 | 128099.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
