Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2og-fe(ii) oxygenase | PviCFBP13507_09425 | Not Available | Negative | 2120990 - 2122531 | 56144.4 |
| hypothetical protein | PviCFBP13507_09430 | Not Available | Positive | 2122972 - 2123772 | 30627.1 |
| tetr family transcriptional regulator | PviCFBP13507_09435 | Not Available | Negative | 2123820 - 2124446 | 22688.1 |
| mfs transporter | PviCFBP13507_09440 | Not Available | Positive | 2124616 - 2125761 | 39897.8 |
| alpha/beta hydrolase | PviCFBP13507_09445 | Not Available | Negative | 2125801 - 2126742 | 34882.1 |
| hypothetical protein | PviCFBP13507_09450 | Not Available | Positive | 2126968 - 2127447 | 17893.3 |
| duf3144 domain-containing protein | PviCFBP13507_09455 | Not Available | Negative | 2127496 - 2127792 | 11443.3 |
| duf3592 domain-containing protein | PviCFBP13507_09460 | Not Available | Negative | 2127963 - 2128400 | 15403.3 |
| gnat family n-acetyltransferase | PviCFBP13507_09465 | Not Available | Positive | 2128489 - 2128932 | 16341.7 |
| hypothetical protein | PviCFBP13507_09470 | Not Available | Positive | 2129136 - 2130131 | 37128.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
