Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl-[acyl-carrier-protein] synthase ii | PviCFBP13507_09375 | Not Available | Positive | 2111261 - 2112541 | 44094.5 |
| mfs transporter | PviCFBP13507_09380 | Not Available | Positive | 2112974 - 2114191 | 41605.1 |
| hypothetical protein | PviCFBP13507_09385 | Not Available | Negative | 2114206 - 2115579 | 51304.9 |
| methyl-accepting chemotaxis protein | PviCFBP13507_09390 | Not Available | Positive | 2115859 - 2117478 | 57843.8 |
| transcriptional regulator | PviCFBP13507_09395 | Not Available | Negative | 2117527 - 2117973 | 16961.6 |
| aromatic alcohol reductase | PviCFBP13507_09400 | Not Available | Positive | 2118070 - 2119011 | 34704.8 |
| hypothetical protein | PviCFBP13507_09405 | Not Available | Positive | 2119172 - 2119753 | 21670.4 |
| hypothetical protein | PviCFBP13507_09410 | Not Available | Negative | 2119732 - 2120109 | 14425.5 |
| hypothetical protein | PviCFBP13507_09415 | Not Available | Negative | 2120240 - 2120437 | 7225.65 |
| hypothetical protein | PviCFBP13507_09420 | Not Available | Negative | 2120590 - 2120853 | 9791.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
