Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenine-n(1))-methyltransferase | PviCFBP13507_09325 | Not Available | Positive | 2099238 - 2099939 | 25997.7 |
| eama family transporter | PviCFBP13507_09330 | Not Available | Negative | 2099936 - 2100778 | 29122.5 |
| transcriptional regulator gcva | PviCFBP13507_09335 | Not Available | Positive | 2100914 - 2101801 | 32501.3 |
| yafy family transcriptional regulator | PviCFBP13507_09340 | Not Available | Negative | 2101819 - 2102523 | 26622.4 |
| alcohol dehydrogenase | PviCFBP13507_09345 | Not Available | Negative | 2102526 - 2103458 | 33079.4 |
| peptide abc transporter atp-binding protein | PviCFBP13507_09350 | Not Available | Negative | 2103917 - 2104660 | 27906.7 |
| rnd transporter | PviCFBP13507_09355 | Not Available | Negative | 2104810 - 2106267 | 51202.6 |
| tetr family transcriptional regulator | PviCFBP13507_09360 | Not Available | Positive | 2106355 - 2106969 | 22721.3 |
| efflux rnd transporter periplasmic adaptor subunit | PviCFBP13507_09365 | Not Available | Positive | 2107045 - 2108151 | 37843.3 |
| mfs transporter | PviCFBP13507_09370 | Not Available | Positive | 2108148 - 2111258 | 112909.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
