Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sorbosone dehydrogenase family protein | PviCFBP13507_09070 | Not Available | Negative | 2022250 - 2023542 | 46123.5 |
| hypothetical protein | PviCFBP13507_09075 | Not Available | Negative | 2023539 - 2023967 | 15443.2 |
| hypothetical protein | PviCFBP13507_09080 | Not Available | Positive | 2024591 - 2025169 | 21552.8 |
| hypothetical protein | PviCFBP13507_09085 | Not Available | Negative | 2025177 - 2025548 | 13190.7 |
| hypothetical protein | PviCFBP13507_09090 | Not Available | Negative | 2025610 - 2026065 | 16900.1 |
| cytoplasmic protein | PviCFBP13507_09095 | Not Available | Negative | 2026065 - 2026565 | 18554.8 |
| nad-dependent dehydratase | PviCFBP13507_09100 | Not Available | Negative | 2026700 - 2027761 | 38947.1 |
| duf2256 domain-containing protein | PviCFBP13507_09105 | Not Available | Negative | 2027840 - 2027989 | 5872.19 |
| cryptochrome/photolyase family protein | PviCFBP13507_09110 | Not Available | Negative | 2027986 - 2029524 | 58487.7 |
| nudix hydrolase | PviCFBP13507_09115 | Not Available | Negative | 2029562 - 2030101 | 19123.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
