Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mce family protein | PviCFBP13507_00750 | Not Available | Negative | 176025 - 177701 | 60723.3 |
| paraquat-inducible protein a | PviCFBP13507_00755 | Not Available | Negative | 177694 - 178308 | 23220.9 |
| paraquat-inducible protein a | PviCFBP13507_00760 | Not Available | Negative | 178305 - 178934 | 22919.1 |
| hypothetical protein | PviCFBP13507_00765 | Not Available | Negative | 179179 - 179478 | 11000.9 |
| peptidase m4 family protein | PviCFBP13507_00770 | Not Available | Negative | 179498 - 180565 | 38574.3 |
| hypothetical protein | PviCFBP13507_00775 | Not Available | Positive | 180855 - 181184 | 11848.1 |
| duf883 domain-containing protein | PviCFBP13507_00780 | Not Available | Negative | 181259 - 181576 | 11179.3 |
| hypothetical protein | PviCFBP13507_00785 | Not Available | Positive | 181730 - 181984 | 9624.55 |
| hypothetical protein | PviCFBP13507_00790 | Not Available | Negative | 182028 - 182507 | 16922.7 |
| acetyl-coa c-acetyltransferase | PviCFBP13507_00795 | Not Available | Positive | 182713 - 183933 | 42433.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
