Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit epsilon | PviCFBP13507_08920 | Not Available | Positive | 1987014 - 1987793 | 28096.1 |
| gnat family n-acetyltransferase | PviCFBP13507_08925 | Not Available | Positive | 1987816 - 1988373 | 21070.8 |
| hypothetical protein | PviCFBP13507_08930 | Not Available | Negative | 1988405 - 1988617 | 7816.29 |
| nad(p)h-dependent oxidoreductase | PviCFBP13507_08935 | Not Available | Positive | 1988830 - 1989390 | 19798.6 |
| hypothetical protein | PviCFBP13507_08940 | Not Available | Positive | 1989542 - 1994752 | 193358.0 |
| acyl-coa dehydrogenase | PviCFBP13507_08945 | Not Available | Negative | 1994826 - 1995977 | 41846.2 |
| enoyl-coa hydratase/isomerase family protein | PviCFBP13507_08950 | Not Available | Negative | 1995981 - 1997078 | 40498.0 |
| mfs transporter | PviCFBP13507_08955 | Not Available | Positive | 1997415 - 1999043 | 58071.4 |
| multidrug transporter emra | PviCFBP13507_08960 | Not Available | Positive | 1999040 - 2000239 | 43066.3 |
| inorganic phosphate transporter | PviCFBP13507_08965 | Not Available | Negative | 2000480 - 2002096 | 56975.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
