Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-[acyl-carrier-protein] reductase fabi | PviCFBP13507_08870 | Not Available | Negative | 1974700 - 1975494 | 27960.4 |
| microcin abc transporter atp-binding protein | PviCFBP13507_08875 | Not Available | Negative | 1975513 - 1977123 | 58975.1 |
| abc transporter permease | PviCFBP13507_08880 | Not Available | Negative | 1977125 - 1978144 | 37840.7 |
| microcin abc transporter permease | PviCFBP13507_08885 | Not Available | Negative | 1978146 - 1979219 | 39335.7 |
| abc transporter substrate-binding protein | PviCFBP13507_08890 | Not Available | Negative | 1979221 - 1981077 | 70045.2 |
| abc transporter substrate-binding protein | PviCFBP13507_08895 | Not Available | Negative | 1981074 - 1982903 | 69489.7 |
| lytic transglycosylase | PviCFBP13507_08900 | Not Available | Negative | 1983090 - 1984691 | 59446.8 |
| hydroxyacylglutathione hydrolase | PviCFBP13507_08905 | Not Available | Negative | 1984791 - 1985570 | 28713.1 |
| methyltransferase domain-containing protein | PviCFBP13507_08910 | Not Available | Positive | 1985652 - 1986410 | 27868.8 |
| ribonuclease hi | PviCFBP13507_08915 | Not Available | Positive | 1986463 - 1986915 | 16764.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
