Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | PviCFBP13507_08820 | Not Available | Negative | 1964154 - 1965008 | 30369.1 |
| Trna-arg | Not Available | Not Available | Positive | 1965304 - 1965380 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 1965433 - 1965508 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 1965565 - 1965649 | Not Available |
| trigger factor | PviCFBP13507_08840 | Not Available | Positive | 1966024 - 1967334 | 48602.6 |
| atp-dependent clp protease proteolytic subunit | PviCFBP13507_08845 | Not Available | Positive | 1967426 - 1968067 | 23579.4 |
| atp-dependent clp protease atp-binding subunit clpx | PviCFBP13507_08850 | Not Available | Positive | 1968175 - 1969458 | 46963.2 |
| endopeptidase la | PviCFBP13507_08855 | Not Available | Positive | 1969666 - 1972062 | 88849.7 |
| hu family dna-binding protein | PviCFBP13507_08860 | Not Available | Positive | 1972207 - 1972479 | 9093.95 |
| peptidylprolyl isomerase | PviCFBP13507_08865 | Not Available | Positive | 1972685 - 1974568 | 68884.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
