Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | PviCFBP13507_08770 | Not Available | Negative | 1951747 - 1952250 | 18218.6 |
| glutamine--trna ligase | PviCFBP13507_08775 | Not Available | Positive | 1952469 - 1954163 | 64566.1 |
| cysteine--trna ligase | PviCFBP13507_08780 | Not Available | Positive | 1954187 - 1955569 | 51364.0 |
| sigma-54-dependent fis family transcriptional regulator | PviCFBP13507_08785 | Not Available | Negative | 1955913 - 1957772 | 68679.1 |
| abc transporter atp-binding protein | PviCFBP13507_08790 | Not Available | Positive | 1958068 - 1959162 | 40623.1 |
| abc transporter atp-binding protein | PviCFBP13507_08795 | Not Available | Positive | 1959162 - 1960271 | 41418.1 |
| sugar abc transporter permease | PviCFBP13507_08800 | Not Available | Positive | 1960268 - 1961137 | 32691.3 |
| carbohydrate abc transporter permease | PviCFBP13507_08805 | Not Available | Positive | 1961148 - 1961948 | 29825.1 |
| hypothetical protein | PviCFBP13507_08810 | Not Available | Positive | 1961960 - 1962232 | 10029.5 |
| carbohydrate abc transporter substrate-binding protein | PviCFBP13507_08815 | Not Available | Positive | 1962317 - 1964089 | 65605.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
