Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eama family transporter | PviCFBP13507_08720 | Not Available | Negative | 1940106 - 1941011 | 31341.5 |
| gntr family transcriptional regulator | PviCFBP13507_08725 | Not Available | Positive | 1941106 - 1942437 | 47979.6 |
| hypothetical protein | PviCFBP13507_08730 | Not Available | Positive | 1942737 - 1943054 | 11864.7 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | PviCFBP13507_08735 | Not Available | Negative | 1943136 - 1945736 | 93814.7 |
| duf1289 domain-containing protein | PviCFBP13507_08740 | Not Available | Positive | 1946138 - 1946608 | 18343.3 |
| pp_01730 | PviCFBP13507_08745 | Not Available | Positive | 1946691 - 1947302 | Not Available |
| marr family transcriptional regulator | PviCFBP13507_08750 | Not Available | Positive | 1947462 - 1947947 | 18096.9 |
| emra/emrk family multidrug efflux transporter periplasmic adaptor subunit | PviCFBP13507_08755 | Not Available | Positive | 1948023 - 1949240 | 43315.2 |
| mfs transporter | PviCFBP13507_08760 | Not Available | Positive | 1949304 - 1950842 | 55515.7 |
| udp-2,3-diacylglucosamine diphosphatase | PviCFBP13507_08765 | Not Available | Negative | 1950989 - 1951750 | 28728.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
