Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | PviCFBP13507_08620 | Not Available | Positive | 1914584 - 1915897 | 47801.6 |
| fah family protein | PviCFBP13507_08625 | Not Available | Positive | 1915931 - 1916923 | 36422.0 |
| hypothetical protein | PviCFBP13507_08630 | Not Available | Positive | 1917283 - 1917567 | 10550.1 |
| hypothetical protein | PviCFBP13507_08635 | Not Available | Positive | 1917680 - 1918222 | 19876.2 |
| lactonase family protein | PviCFBP13507_08640 | Not Available | Positive | 1918330 - 1919502 | 42531.6 |
| hypothetical protein | PviCFBP13507_08645 | Not Available | Positive | 1919690 - 1919872 | 6380.44 |
| glutathione s-transferase | PviCFBP13507_08650 | Not Available | Negative | 1920119 - 1920718 | 23280.1 |
| chromosome segregation protein smc | PviCFBP13507_08655 | Not Available | Negative | 1920715 - 1924362 | 137029.0 |
| exonuclease subunit sbcd | PviCFBP13507_08660 | Not Available | Negative | 1924359 - 1925603 | 46004.8 |
| protein batd | PviCFBP13507_08665 | Not Available | Negative | 1925643 - 1927301 | 60519.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
