Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1853 domain-containing protein | PviCFBP13507_08520 | Not Available | Negative | 1892151 - 1893134 | 37440.4 |
| ggdef domain-containing protein | PviCFBP13507_08525 | Not Available | Positive | 1893466 - 1894551 | 39676.5 |
| nad(+) kinase | PviCFBP13507_08530 | Not Available | Positive | 1894648 - 1895538 | 32227.3 |
| serine/threonine protein phosphatase | PviCFBP13507_08535 | Not Available | Positive | 1895538 - 1896509 | 36614.7 |
| rhomboid family intramembrane serine protease | PviCFBP13507_08540 | Not Available | Positive | 1896506 - 1897378 | 31859.6 |
| duf1315 domain-containing protein | PviCFBP13507_08545 | Not Available | Positive | 1897407 - 1897667 | 9710.52 |
| duf2797 domain-containing protein | PviCFBP13507_08550 | Not Available | Positive | 1897697 - 1898500 | 29845.8 |
| aminopeptidase n | PviCFBP13507_08555 | Not Available | Positive | 1898513 - 1901179 | 99484.5 |
| duf2170 domain-containing protein | PviCFBP13507_08560 | Not Available | Positive | 1901424 - 1902077 | 23988.8 |
| pspa/im30 family protein | PviCFBP13507_08565 | Not Available | Positive | 1902104 - 1902811 | 25078.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
