Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyltransferase | PviCFBP13507_00695 | Not Available | Negative | 167529 - 168047 | 19182.0 |
| lysr family transcriptional regulator | PviCFBP13507_00700 | Not Available | Negative | 168056 - 168988 | 34213.0 |
| oxidoreductase | PviCFBP13507_00705 | Not Available | Positive | 169088 - 169951 | 30614.8 |
| hypothetical protein | PviCFBP13507_00710 | Not Available | Negative | 169973 - 170830 | 30637.5 |
| lysr family transcriptional regulator | PviCFBP13507_00715 | Not Available | Positive | 170952 - 171872 | 33363.2 |
| nadp oxidoreductase | PviCFBP13507_00720 | Not Available | Negative | 171884 - 172534 | 22345.6 |
| transcriptional regulator | PviCFBP13507_00725 | Not Available | Negative | 172721 - 173167 | 15541.8 |
| sam-dependent methyltransferase | PviCFBP13507_00735 | Not Available | Negative | 173628 - 174440 | 30009.5 |
| transcriptional regulator | PviCFBP13507_00740 | Not Available | Negative | 174669 - 175118 | 16480.6 |
| hypothetical protein | PviCFBP13507_00745 | Not Available | Negative | 175405 - 176028 | 22363.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
