Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtmp kinase | PviCFBP13507_08360 | Not Available | Positive | 1860090 - 1860722 | 23022.6 |
| dna polymerase iii subunit delta' | PviCFBP13507_08365 | Not Available | Positive | 1860715 - 1861701 | 36184.1 |
| pilus assembly protein pilz | PviCFBP13507_08370 | Not Available | Positive | 1861732 - 1862088 | 12793.6 |
| hydrolase tatd | PviCFBP13507_08375 | Not Available | Positive | 1862103 - 1862888 | 28635.0 |
| tetr/acrr family transcriptional regulator | PviCFBP13507_08380 | Not Available | Positive | 1863331 - 1863993 | 25770.9 |
| duf4823 domain-containing protein | PviCFBP13507_08385 | Not Available | Positive | 1864117 - 1864719 | 22185.6 |
| duf1285 domain-containing protein | PviCFBP13507_08390 | Not Available | Positive | 1864729 - 1865289 | 20859.2 |
| aspartate-semialdehyde dehydrogenase | PviCFBP13507_08395 | Not Available | Positive | 1865375 - 1866388 | 35532.6 |
| peptidoglycan-binding protein | PviCFBP13507_08400 | Not Available | Positive | 1866497 - 1869349 | 99969.9 |
| trna pseudouridine(38-40) synthase trua | PviCFBP13507_08405 | Not Available | Positive | 1869503 - 1870327 | 30766.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
