Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biopolymer transporter exbd | PviCFBP13507_08260 | Not Available | Positive | 1841844 - 1842275 | 15686.9 |
| tetraacyldisaccharide 4'-kinase | PviCFBP13507_08265 | Not Available | Positive | 1842275 - 1843270 | 36587.0 |
| trm112 family protein | PviCFBP13507_08270 | Not Available | Positive | 1843288 - 1843473 | 6600.16 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | PviCFBP13507_08275 | Not Available | Positive | 1843470 - 1844234 | 27577.0 |
| udp-n-acetylenolpyruvoylglucosamine reductase | PviCFBP13507_08280 | Not Available | Positive | 1844269 - 1845288 | 37120.5 |
| ribonuclease e | PviCFBP13507_08285 | Not Available | Negative | 1845401 - 1848700 | 121802.0 |
| hypothetical protein | PviCFBP13507_08290 | Not Available | Positive | 1848776 - 1849072 | 11038.5 |
| 23s rrna pseudouridine(955/2504/2580) synthase rluc | PviCFBP13507_08295 | Not Available | Positive | 1849370 - 1850329 | 35658.8 |
| had family hydrolase | PviCFBP13507_08300 | Not Available | Positive | 1850316 - 1850975 | 24404.1 |
| s49 family peptidase | PviCFBP13507_08305 | Not Available | Positive | 1851000 - 1851998 | 36251.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
