Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna helicase recq | PviCFBP13507_08210 | Not Available | Positive | 1828038 - 1830167 | 78908.9 |
| marr family transcriptional regulator | PviCFBP13507_08215 | Not Available | Positive | 1830260 - 1830694 | 16245.8 |
| peptigoglycan-binding protein lysm | PviCFBP13507_08220 | Not Available | Positive | 1830853 - 1832973 | 74578.9 |
| dehydrogenase | PviCFBP13507_08225 | Not Available | Negative | 1833117 - 1833527 | 15845.6 |
| acyl-coa dehydrogenase | PviCFBP13507_08230 | Not Available | Negative | 1833624 - 1836071 | 89199.3 |
| glutathione s-transferase | PviCFBP13507_08235 | Not Available | Positive | 1836234 - 1836857 | 23289.8 |
| abc transporter atp-binding protein | PviCFBP13507_08240 | Not Available | Positive | 1837029 - 1837961 | 34354.6 |
| abc transporter permease | PviCFBP13507_08245 | Not Available | Positive | 1837958 - 1838746 | 29033.6 |
| dna internalization-related competence protein comec/rec2 | PviCFBP13507_08250 | Not Available | Positive | 1838882 - 1841098 | 80153.0 |
| mota/tolq/exbb proton channel family protein | PviCFBP13507_08255 | Not Available | Positive | 1841131 - 1841847 | 25836.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
