Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain-fatty-acid--coa ligase | PviCFBP13507_08110 | Not Available | Positive | 1793467 - 1795155 | 61537.1 |
| long-chain fatty acid--coa ligase | PviCFBP13507_08115 | Not Available | Positive | 1795512 - 1797203 | 62075.9 |
| atp-dependent rna helicase hrpa | PviCFBP13507_08120 | Not Available | Positive | 1797355 - 1801266 | 147597.0 |
| beta-ketoacyl-acp synthase iii | PviCFBP13507_08125 | Not Available | Positive | 1801559 - 1802680 | 40390.8 |
| n-acetyltransferase | PviCFBP13507_08130 | Not Available | Positive | 1802826 - 1803950 | 42382.1 |
| hypothetical protein | PviCFBP13507_08135 | Not Available | Positive | 1804441 - 1804737 | 10436.4 |
| osmoprotectant naggn system m42 family peptidase | PviCFBP13507_08140 | Not Available | Negative | 1804646 - 1805839 | 42915.6 |
| n-acetylglutaminylglutamine synthetase | PviCFBP13507_08145 | Not Available | Negative | 1805923 - 1807671 | 64837.1 |
| n-acetylglutaminylglutamine amidotransferase | PviCFBP13507_08150 | Not Available | Negative | 1807676 - 1809448 | 65601.5 |
| iron abc transporter permease | PviCFBP13507_08155 | Not Available | Negative | 1809616 - 1810692 | 39851.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
