Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompa family protein | PviCFBP13507_07995 | Not Available | Positive | 1768870 - 1769997 | 38980.5 |
| pyridoxamine 5'-phosphate oxidase | PviCFBP13507_08000 | Not Available | Positive | 1770132 - 1770779 | 24791.1 |
| glycine zipper 2tm domain-containing protein | PviCFBP13507_08005 | Not Available | Positive | 1770927 - 1771391 | 15768.9 |
| na+/h+ antiporter nhaa | PviCFBP13507_08010 | Not Available | Negative | 1771462 - 1772646 | 41261.2 |
| hypothetical protein | PviCFBP13507_08015 | Not Available | Negative | 1772923 - 1774536 | 58532.3 |
| hypothetical protein | PviCFBP13507_08020 | Not Available | Negative | 1774689 - 1775369 | 24719.4 |
| abc transporter atp-binding protein | PviCFBP13507_08035 | Not Available | Negative | 1776139 - 1776840 | 25712.5 |
| abc transporter atp-binding protein | PviCFBP13507_08040 | Not Available | Negative | 1776841 - 1777608 | 28218.4 |
| high-affinity branched-chain amino acid abc transporter permease livm | PviCFBP13507_08045 | Not Available | Negative | 1777605 - 1778870 | 45973.9 |
| high-affinity branched-chain amino acid abc transporter permease livh | PviCFBP13507_08050 | Not Available | Negative | 1778867 - 1779790 | 32199.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
