Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | PviCFBP13507_07945 | Not Available | Positive | 1757481 - 1759919 | 87584.1 |
| hypothetical protein | PviCFBP13507_07950 | Not Available | Negative | 1760209 - 1760682 | 17155.1 |
| hypothetical protein | PviCFBP13507_07955 | Not Available | Negative | 1760686 - 1761183 | 18646.3 |
| duf1145 domain-containing protein | PviCFBP13507_07960 | Not Available | Positive | 1761438 - 1761713 | 10076.8 |
| hypothetical protein | PviCFBP13507_07965 | Not Available | Positive | 1761706 - 1762464 | 25281.2 |
| purine nucleoside permease | PviCFBP13507_07970 | Not Available | Negative | 1762525 - 1763547 | 37558.6 |
| nucleoside-specific channel-forming protein tsx | PviCFBP13507_07975 | Not Available | Negative | 1763574 - 1764488 | 34003.2 |
| hypothetical protein | PviCFBP13507_07980 | Not Available | Negative | 1764733 - 1765197 | 17186.8 |
| atp-dependent dna helicase ding | PviCFBP13507_07985 | Not Available | Positive | 1765305 - 1767449 | 78844.3 |
| esta family serine hydrolase | PviCFBP13507_07990 | Not Available | Positive | 1767566 - 1768714 | 41216.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
