Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_07795 | Not Available | Negative | 1728874 - 1729149 | 10500.7 |
| hypothetical protein | PviCFBP13507_07800 | Not Available | Negative | 1729231 - 1729668 | 16722.2 |
| hypothetical protein | PviCFBP13507_07805 | Not Available | Negative | 1729937 - 1730464 | 19392.2 |
| dna-binding response regulator | PviCFBP13507_07810 | Not Available | Positive | 1731727 - 1732353 | 22975.3 |
| hypothetical protein | PviCFBP13507_07815 | Not Available | Negative | 1732502 - 1732684 | 6996.11 |
| endonuclease iii | PviCFBP13507_07820 | Not Available | Negative | 1732790 - 1733428 | 23883.9 |
| electron transport complex subunit rsxb | PviCFBP13507_07825 | Not Available | Negative | 1733532 - 1734572 | 36967.7 |
| methionine--trna ligase | PviCFBP13507_07830 | Not Available | Negative | 1734686 - 1736728 | 75384.8 |
| iron-sulfur cluster carrier protein apbc | PviCFBP13507_07835 | Not Available | Positive | 1736904 - 1737998 | 38678.8 |
| cold-shock protein capb | PviCFBP13507_07840 | Not Available | Negative | 1738131 - 1738340 | 7727.11 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
