Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine carbamoyltransferase | PviCFBP13507_07745 | Not Available | Negative | 1719161 - 1720081 | 34195.3 |
| hypothetical protein | PviCFBP13507_07750 | Not Available | Positive | 1720521 - 1720814 | 10863.1 |
| dehydrogenase | PviCFBP13507_07755 | Not Available | Positive | 1720946 - 1723054 | 76971.1 |
| grx4 family monothiol glutaredoxin | PviCFBP13507_07760 | Not Available | Positive | 1723145 - 1723471 | 11678.1 |
| bacterioferritin | PviCFBP13507_07765 | Not Available | Negative | 1723589 - 1724059 | 17832.6 |
| (2fe-2s)-binding protein | PviCFBP13507_07770 | Not Available | Negative | 1724260 - 1724478 | 7767.33 |
| ribonuclease t | PviCFBP13507_07775 | Not Available | Negative | 1724673 - 1725353 | 24642.9 |
| dihydroorotase | PviCFBP13507_07780 | Not Available | Negative | 1725350 - 1726393 | 38287.7 |
| ompa family protein | PviCFBP13507_07785 | Not Available | Positive | 1726540 - 1727442 | 33199.6 |
| argininosuccinate synthase | PviCFBP13507_07790 | Not Available | Positive | 1727575 - 1728792 | 45315.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
