Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter atp-binding protein | PviCFBP13507_07695 | Not Available | Negative | 1708254 - 1708988 | 26878.8 |
| amino acid abc transporter permease | PviCFBP13507_07700 | Not Available | Negative | 1708985 - 1709650 | 24214.6 |
| amino acid abc transporter permease | PviCFBP13507_07705 | Not Available | Negative | 1709650 - 1710396 | 27657.3 |
| amino acid abc transporter substrate-binding protein | PviCFBP13507_07710 | Not Available | Negative | 1710510 - 1711442 | 33775.7 |
| glycerol-3-phosphate dehydrogenase | PviCFBP13507_07715 | Not Available | Negative | 1711906 - 1713447 | 57126.2 |
| deor/glpr family transcriptional regulator | PviCFBP13507_07720 | Not Available | Negative | 1713996 - 1714751 | 27711.3 |
| glycerol kinase | PviCFBP13507_07725 | Not Available | Negative | 1714850 - 1716355 | 55842.4 |
| aquaporin | PviCFBP13507_07730 | Not Available | Negative | 1716386 - 1717255 | 30362.7 |
| cys-trna(pro) deacylase | PviCFBP13507_07735 | Not Available | Positive | 1717608 - 1718078 | 16630.1 |
| abc transporter atp-binding protein | PviCFBP13507_07740 | Not Available | Negative | 1718088 - 1719152 | 38641.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
