Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase inhibitor i42 | PviCFBP13507_07495 | Not Available | Negative | 1663495 - 1663887 | 13927.8 |
| endopeptidase la | PviCFBP13507_07500 | Not Available | Negative | 1664082 - 1666499 | 89204.6 |
| methylamine utilization protein | PviCFBP13507_07505 | Not Available | Positive | 1666683 - 1667360 | 24468.1 |
| hypothetical protein | PviCFBP13507_07510 | Not Available | Positive | 1667357 - 1669711 | 85143.0 |
| duf3034 domain-containing protein | PviCFBP13507_07515 | Not Available | Positive | 1669715 - 1670578 | 31085.6 |
| group 1 truncated hemoglobin | PviCFBP13507_07520 | Not Available | Positive | 1670578 - 1671000 | 15714.4 |
| fcd domain-containing protein | PviCFBP13507_07525 | Not Available | Negative | 1671256 - 1672335 | 40179.4 |
| amidase | PviCFBP13507_07530 | Not Available | Positive | 1672599 - 1673972 | 48054.6 |
| duf2334 domain-containing protein | PviCFBP13507_07535 | Not Available | Positive | 1674072 - 1674953 | 33862.3 |
| mfs transporter | PviCFBP13507_07540 | Not Available | Positive | 1674981 - 1676321 | 47646.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
