Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_00590 | Not Available | Positive | 147972 - 148418 | 16085.2 |
| hypothetical protein | PviCFBP13507_00605 | Not Available | Positive | 150105 - 150437 | 12925.4 |
| hypothetical protein | PviCFBP13507_00610 | Not Available | Negative | 150449 - 150658 | 8184.99 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | PviCFBP13507_00615 | Not Available | Negative | 150772 - 151383 | 22897.3 |
| type ii secretion system protein gsph | PviCFBP13507_00620 | Not Available | Negative | 151380 - 151841 | 16981.4 |
| general secretion pathway protein gspc | PviCFBP13507_00625 | Not Available | Positive | 151925 - 152356 | 14683.7 |
| type ii secretion system protein gspi | PviCFBP13507_00630 | Not Available | Negative | 152362 - 152748 | 14062.5 |
| type ii secretion system protein gspg | PviCFBP13507_00635 | Not Available | Positive | 152893 - 153342 | 16257.5 |
| hxcx atypical pseudopilin | PviCFBP13507_00640 | Not Available | Positive | 153372 - 154331 | 34953.0 |
| type ii secretion system protein gspl | PviCFBP13507_00645 | Not Available | Positive | 154328 - 155503 | 41759.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
