Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor 4 | PviCFBP13507_07445 | Not Available | Positive | 1655125 - 1656921 | 66311.3 |
| signal peptidase i | PviCFBP13507_07450 | Not Available | Positive | 1656931 - 1657785 | 32118.1 |
| duf4845 domain-containing protein | PviCFBP13507_07455 | Not Available | Positive | 1657877 - 1658254 | 14189.3 |
| ribonuclease 3 | PviCFBP13507_07460 | Not Available | Positive | 1658251 - 1658940 | 25520.6 |
| gtpase era | PviCFBP13507_07465 | Not Available | Positive | 1658933 - 1659835 | 33864.9 |
| dna repair protein reco | PviCFBP13507_07470 | Not Available | Positive | 1659893 - 1660576 | 24910.3 |
| pyridoxine 5'-phosphate synthase | PviCFBP13507_07475 | Not Available | Positive | 1660628 - 1661368 | 26612.1 |
| hypothetical protein | PviCFBP13507_07480 | Not Available | Negative | 1661316 - 1661579 | 10050.4 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | PviCFBP13507_07485 | Not Available | Negative | 1661683 - 1662642 | 36254.8 |
| carboxy-s-adenosyl-l-methionine synthase cmoa | PviCFBP13507_07490 | Not Available | Negative | 1662639 - 1663382 | 27629.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
