Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | PviCFBP13507_07340 | Not Available | Negative | 1634582 - 1635397 | 29857.0 |
| lipid kinase | PviCFBP13507_07345 | Not Available | Negative | 1635425 - 1636498 | 37987.4 |
| hypothetical protein | PviCFBP13507_07355 | Not Available | Positive | 1637052 - 1637486 | 16456.0 |
| enoyl-coa hydratase/isomerase family protein | PviCFBP13507_07360 | Not Available | Negative | 1637703 - 1638815 | 40864.1 |
| uracil-dna glycosylase | PviCFBP13507_07365 | Not Available | Positive | 1638983 - 1639675 | 25897.9 |
| hypothetical protein | PviCFBP13507_07370 | Not Available | Negative | 1639680 - 1640714 | 37233.8 |
| tripartite tricarboxylate transporter permease | PviCFBP13507_07375 | Not Available | Negative | 1640707 - 1642221 | 53071.0 |
| tripartite tricarboxylate transporter tctb family protein | PviCFBP13507_07380 | Not Available | Negative | 1642224 - 1642682 | 16576.4 |
| tripartite tricarboxylate transporter substrate binding protein | PviCFBP13507_07385 | Not Available | Negative | 1642745 - 1643722 | 35161.5 |
| dna-binding response regulator | PviCFBP13507_07390 | Not Available | Positive | 1644214 - 1644885 | 24614.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
