Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 1621097 - 1621170 | Not Available |
| alpha/beta hydrolase | PviCFBP13507_07295 | Not Available | Negative | 1621327 - 1622220 | 33563.9 |
| 16s rrna pseudouridine(516) synthase | PviCFBP13507_07300 | Not Available | Negative | 1622520 - 1623212 | 26671.1 |
| helicase | PviCFBP13507_07305 | Not Available | Negative | 1623258 - 1623479 | 7842.35 |
| hypothetical protein | PviCFBP13507_07310 | Not Available | Negative | 1623515 - 1626760 | 120350.0 |
| allophanate hydrolase | PviCFBP13507_07315 | Not Available | Negative | 1626855 - 1628663 | 63967.6 |
| urea carboxylase | PviCFBP13507_07320 | Not Available | Negative | 1628695 - 1632324 | 130579.0 |
| urea carboxylase-associated family protein | PviCFBP13507_07325 | Not Available | Negative | 1632445 - 1633062 | 22727.9 |
| urea carboxylase-associated family protein | PviCFBP13507_07330 | Not Available | Negative | 1633081 - 1633806 | 26675.8 |
| lauroyl acyltransferase | PviCFBP13507_07335 | Not Available | Negative | 1633803 - 1634585 | 28947.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
