Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mandelate racemase | PviCFBP13507_07240 | Not Available | Positive | 1610767 - 1611936 | 43405.8 |
| c4-dicarboxylate transporter dcta | PviCFBP13507_07245 | Not Available | Positive | 1612014 - 1613330 | 46104.3 |
| hypothetical protein | PviCFBP13507_07250 | Not Available | Negative | 1613399 - 1614034 | 23456.8 |
| hypothetical protein | PviCFBP13507_07255 | Not Available | Positive | 1614206 - 1614475 | 9488.36 |
| arsr family transcriptional regulator | PviCFBP13507_07260 | Not Available | Negative | 1614480 - 1614779 | 11062.4 |
| nadh:flavin oxidoreductase/nadh oxidase | PviCFBP13507_07265 | Not Available | Positive | 1614866 - 1615957 | 39739.9 |
| type ii toxin-antitoxin system hicb family antitoxin | PviCFBP13507_07270 | Not Available | Negative | 1616084 - 1616494 | 14851.4 |
| addiction module toxin, hica family | PviCFBP13507_07275 | Not Available | Negative | 1616600 - 1616782 | 6889.35 |
| autotransporter outer membrane beta-barrel domain-containing protein | PviCFBP13507_07280 | Not Available | Negative | 1617066 - 1620092 | 103899.0 |
| hypothetical protein | PviCFBP13507_07285 | Not Available | Positive | 1620378 - 1620878 | 18143.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
