Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulp family inorganic anion transporter | PviCFBP13507_07190 | Not Available | Positive | 1599805 - 1601292 | 52635.7 |
| amidase | PviCFBP13507_07195 | Not Available | Positive | 1601540 - 1602943 | 49482.9 |
| deor/glpr transcriptional regulator | PviCFBP13507_07200 | Not Available | Positive | 1603027 - 1603785 | 28272.2 |
| zn-dependent hydrolase | PviCFBP13507_07205 | Not Available | Positive | 1603763 - 1605043 | 45868.1 |
| aminoglycoside phosphotransferase | PviCFBP13507_07210 | Not Available | Positive | 1605053 - 1606009 | 35899.5 |
| choline/ethanolamine kinase--aminoglycoside phosphotransferase | PviCFBP13507_07215 | Not Available | Positive | 1606006 - 1606941 | 35481.9 |
| hypothetical protein | PviCFBP13507_07220 | Not Available | Positive | 1607058 - 1607315 | 9288.73 |
| sodium:solute symporter family protein | PviCFBP13507_07225 | Not Available | Positive | 1607312 - 1608838 | 54592.8 |
| had-ib family hydrolase | PviCFBP13507_07230 | Not Available | Positive | 1608901 - 1609554 | 24272.1 |
| lysr family transcriptional regulator | PviCFBP13507_07235 | Not Available | Negative | 1609775 - 1610641 | 31778.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
