Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component sensor histidine kinase | PviCFBP13507_07140 | Not Available | Negative | 1587580 - 1589337 | 65460.8 |
| beta-glucosidase bglx | PviCFBP13507_07145 | Not Available | Negative | 1589414 - 1591738 | 83922.7 |
| methanol dehydrogenase | PviCFBP13507_07150 | Not Available | Positive | 1592055 - 1592750 | 24770.1 |
| hypothetical protein | PviCFBP13507_07155 | Not Available | Positive | 1592778 - 1593395 | 22986.9 |
| toxin | PviCFBP13507_07160 | Not Available | Negative | 1593449 - 1594459 | 37475.6 |
| binary cytotoxin component | PviCFBP13507_07165 | Not Available | Negative | 1594476 - 1595630 | 43244.0 |
| sam-dependent methyltransferase | PviCFBP13507_07170 | Not Available | Positive | 1595975 - 1597195 | 45319.1 |
| eama/rhat family transporter | PviCFBP13507_07175 | Not Available | Negative | 1597200 - 1598096 | 32092.2 |
| gnat family n-acetyltransferase | PviCFBP13507_07180 | Not Available | Positive | 1598310 - 1598753 | 16397.8 |
| duf1652 domain-containing protein | PviCFBP13507_07185 | Not Available | Positive | 1598948 - 1599250 | 11185.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
