Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4129 domain-containing protein | PviCFBP13507_06985 | Not Available | Negative | 1548301 - 1549890 | 60397.4 |
| stage ii sporulation protein m | PviCFBP13507_06990 | Not Available | Negative | 1549877 - 1550857 | 36131.0 |
| rdd family protein | PviCFBP13507_06995 | Not Available | Negative | 1550854 - 1551579 | 25958.0 |
| exodeoxyribonuclease i | PviCFBP13507_07005 | Not Available | Positive | 1551759 - 1553189 | 54635.9 |
| h-ns histone | PviCFBP13507_07010 | Not Available | Negative | 1553273 - 1553653 | 14195.0 |
| formyltetrahydrofolate deformylase | PviCFBP13507_07015 | Not Available | Positive | 1554012 - 1554863 | 32562.9 |
| duf2334 domain-containing protein | PviCFBP13507_07020 | Not Available | Negative | 1555093 - 1555878 | 30528.4 |
| glycoside hydrolase | PviCFBP13507_07025 | Not Available | Negative | 1555871 - 1556968 | 39922.4 |
| atp-binding protein | PviCFBP13507_07030 | Not Available | Positive | 1557184 - 1558671 | 53263.1 |
| anion permease | PviCFBP13507_07035 | Not Available | Negative | 1558723 - 1560195 | 52634.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
