Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | PviCFBP13507_00535 | Not Available | Positive | 121461 - 122594 | 39713.8 |
| acriflavin resistance protein | PviCFBP13507_00540 | Not Available | Positive | 122591 - 125686 | 111206.0 |
| gntr family transcriptional regulator | PviCFBP13507_00545 | Not Available | Negative | 125820 - 127256 | 52935.0 |
| glutathione s-transferase | PviCFBP13507_00550 | Not Available | Positive | 127394 - 128020 | 22881.5 |
| thioesterase family protein | PviCFBP13507_00555 | Not Available | Positive | 128147 - 128923 | 27903.4 |
| shlb family hemolysin secretion/activation protein | PviCFBP13507_00560 | Not Available | Positive | 129073 - 130770 | 62681.5 |
| pentapeptide repeat-containing protein | PviCFBP13507_00570 | Not Available | Positive | 145804 - 146283 | 17076.2 |
| hypothetical protein | PviCFBP13507_00575 | Not Available | Positive | 146671 - 146877 | 7903.64 |
| hypothetical protein | PviCFBP13507_00580 | Not Available | Positive | 146964 - 147257 | 10272.4 |
| hypothetical protein | PviCFBP13507_00585 | Not Available | Positive | 147271 - 147558 | 10716.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
