Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cardiolipin synthase b | PviCFBP13507_06880 | Not Available | Positive | 1523483 - 1524640 | 44549.7 |
| duf3077 domain-containing protein | PviCFBP13507_06885 | Not Available | Negative | 1524674 - 1524916 | 8769.49 |
| alpha/beta hydrolase | PviCFBP13507_06890 | Not Available | Positive | 1525451 - 1526338 | 32587.7 |
| atp-binding protein | PviCFBP13507_06895 | Not Available | Positive | 1526678 - 1531252 | 171659.0 |
| endonuclease | PviCFBP13507_06900 | Not Available | Positive | 1531672 - 1532862 | 44921.4 |
| hypothetical protein | PviCFBP13507_06905 | Not Available | Negative | 1533425 - 1533679 | 9749.62 |
| reverse transcriptase | PviCFBP13507_06910 | Not Available | Negative | 1533954 - 1534721 | 28747.6 |
| hypothetical protein | PviCFBP13507_06915 | Not Available | Negative | 1535224 - 1535736 | 18749.0 |
| hypothetical protein | PviCFBP13507_06920 | Not Available | Negative | 1535803 - 1536003 | 7751.86 |
| hypothetical protein | PviCFBP13507_06925 | Not Available | Positive | 1536991 - 1537284 | 11478.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
