Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_06780 | Not Available | Negative | 1500794 - 1501486 | 26627.2 |
| hypothetical protein | PviCFBP13507_06785 | Not Available | Negative | 1501839 - 1505318 | 131033.0 |
| duf4123 domain-containing protein | PviCFBP13507_06790 | Not Available | Negative | 1505315 - 1506199 | 34071.5 |
| peptidase | PviCFBP13507_06795 | Not Available | Negative | 1506399 - 1507757 | 47235.0 |
| ggdef domain-containing protein | PviCFBP13507_06800 | Not Available | Negative | 1507952 - 1510003 | 77148.9 |
| superoxide dismutase | PviCFBP13507_06805 | Not Available | Negative | 1510389 - 1510970 | 21535.1 |
| lysine transporter lyse | PviCFBP13507_06810 | Not Available | Negative | 1511164 - 1511766 | 21101.2 |
| argp/lysg family dna-binding transcriptional regulator | PviCFBP13507_06815 | Not Available | Positive | 1511861 - 1512760 | 33086.1 |
| nad(p)-dependent oxidoreductase | PviCFBP13507_06820 | Not Available | Positive | 1512837 - 1513829 | 36830.5 |
| atpase | PviCFBP13507_06825 | Not Available | Positive | 1513915 - 1514766 | 31026.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
