Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux protein | PviCFBP13507_06730 | Not Available | Negative | 1483071 - 1486124 | 110852.0 |
| efflux rnd transporter periplasmic adaptor subunit | PviCFBP13507_06735 | Not Available | Negative | 1486138 - 1487292 | 40876.4 |
| hypothetical protein | PviCFBP13507_06740 | Not Available | Positive | 1487547 - 1488245 | 25419.8 |
| hypothetical protein | PviCFBP13507_06745 | Not Available | Positive | 1488263 - 1488904 | 23029.5 |
| hypothetical protein | PviCFBP13507_06750 | Not Available | Positive | 1488927 - 1490975 | 75266.1 |
| dna repair protein | PviCFBP13507_06755 | Not Available | Positive | 1491048 - 1495985 | 184569.0 |
| duf1513 domain-containing protein | PviCFBP13507_06760 | Not Available | Negative | 1495982 - 1497079 | 40310.2 |
| imelysin | PviCFBP13507_06765 | Not Available | Negative | 1497096 - 1498160 | 38534.0 |
| thiol oxidoreductase | PviCFBP13507_06770 | Not Available | Negative | 1498194 - 1499621 | 51430.5 |
| hypothetical protein | PviCFBP13507_06775 | Not Available | Negative | 1499725 - 1500438 | 27430.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
