Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hugz family protein | PviCFBP13507_06680 | Not Available | Positive | 1474444 - 1475175 | 27078.2 |
| membrane protein fxsa | PviCFBP13507_06685 | Not Available | Positive | 1475243 - 1475737 | 18365.0 |
| co-chaperone groes | PviCFBP13507_06690 | Not Available | Positive | 1475995 - 1476288 | 10282.4 |
| chaperonin groel | PviCFBP13507_06695 | Not Available | Positive | 1476338 - 1477981 | 57111.1 |
| phosphatase pap2 family protein | PviCFBP13507_06700 | Not Available | Negative | 1478328 - 1479059 | 27164.7 |
| dna-binding response regulator | PviCFBP13507_06705 | Not Available | Positive | 1479240 - 1479923 | 25533.0 |
| two-component sensor histidine kinase | PviCFBP13507_06710 | Not Available | Positive | 1479913 - 1481202 | 47974.3 |
| class i sam-dependent methyltransferase | PviCFBP13507_06715 | Not Available | Positive | 1481387 - 1482067 | 26522.0 |
| inaa protein | PviCFBP13507_06720 | Not Available | Positive | 1482072 - 1482791 | 27403.5 |
| hypothetical protein | PviCFBP13507_06725 | Not Available | Positive | 1482788 - 1483015 | 7917.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
