Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cob(i)yrinic acid a,c-diamide adenosyltransferase | PviCFBP13507_06630 | Not Available | Negative | 1464738 - 1465316 | 20766.0 |
| pas domain-containing sensor histidine kinase | PviCFBP13507_06635 | Not Available | Negative | 1465331 - 1467367 | 75819.0 |
| putative 2-dehydropantoate 2-reductase | PviCFBP13507_06640 | Not Available | Negative | 1467412 - 1468332 | 33166.9 |
| yajq family cyclic di-gmp-binding protein | PviCFBP13507_06645 | Not Available | Positive | 1468504 - 1468983 | 17951.8 |
| mechanosensitive ion channel protein mscs | PviCFBP13507_06650 | Not Available | Positive | 1469103 - 1469945 | 30321.2 |
| hypothetical protein | PviCFBP13507_06655 | Not Available | Negative | 1470000 - 1470323 | 11487.5 |
| ampg family muropeptide mfs transporter | PviCFBP13507_06660 | Not Available | Negative | 1470366 - 1471916 | 56381.4 |
| dna base-flipping protein ybaz | PviCFBP13507_06665 | Not Available | Negative | 1471971 - 1472327 | 12723.2 |
| duf481 domain-containing protein | PviCFBP13507_06670 | Not Available | Positive | 1472488 - 1473495 | 37463.8 |
| kr domain-containing protein | PviCFBP13507_06675 | Not Available | Negative | 1473548 - 1474306 | 26869.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
