Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsl | PviCFBP13507_06530 | Not Available | Positive | 1439835 - 1440128 | 10912.5 |
| penicillin-binding protein 2 | PviCFBP13507_06535 | Not Available | Positive | 1440125 - 1441855 | 62881.2 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | PviCFBP13507_06540 | Not Available | Positive | 1441855 - 1443318 | 51866.9 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | PviCFBP13507_06545 | Not Available | Positive | 1443311 - 1444681 | 47337.5 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | PviCFBP13507_06550 | Not Available | Positive | 1444681 - 1445763 | 39468.6 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | PviCFBP13507_06555 | Not Available | Positive | 1445769 - 1447115 | 48041.7 |
| putative lipid ii flippase ftsw | PviCFBP13507_06560 | Not Available | Positive | 1447112 - 1448326 | 44095.1 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | PviCFBP13507_06565 | Not Available | Positive | 1448316 - 1449386 | 37975.5 |
| udp-n-acetylmuramate--l-alanine ligase | PviCFBP13507_06570 | Not Available | Positive | 1449379 - 1450839 | 52845.8 |
| d-alanine--d-alanine ligase | PviCFBP13507_06575 | Not Available | Positive | 1450836 - 1451795 | 34068.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
