Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c1 | PviCFBP13507_06475 | Not Available | Positive | 1430955 - 1431734 | 29005.2 |
| stringent starvation protein a | PviCFBP13507_06480 | Not Available | Positive | 1431959 - 1432576 | 23357.3 |
| clpxp protease specificity-enhancing factor | PviCFBP13507_06485 | Not Available | Positive | 1432594 - 1433016 | 15405.0 |
| bon domain-containing protein | PviCFBP13507_06490 | Not Available | Negative | 1433066 - 1433644 | 20517.8 |
| phosphoheptose isomerase | PviCFBP13507_06495 | Not Available | Negative | 1433641 - 1434234 | 21303.5 |
| yran family protein | PviCFBP13507_06500 | Not Available | Negative | 1434357 - 1434731 | 13923.6 |
| penicillin-binding protein activator | PviCFBP13507_06505 | Not Available | Negative | 1434728 - 1436542 | 65323.8 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | PviCFBP13507_06510 | Not Available | Positive | 1436817 - 1437686 | 31432.0 |
| division/cell wall cluster transcriptional repressor mraz | PviCFBP13507_06520 | Not Available | Positive | 1438439 - 1438894 | 17194.8 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase | PviCFBP13507_06525 | Not Available | Positive | 1438897 - 1439838 | 34355.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
