Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 3 | PviCFBP13507_00485 | Not Available | Negative | 108969 - 111665 | 96812.1 |
| hypothetical protein | PviCFBP13507_00490 | Not Available | Negative | 111716 - 111955 | 8285.65 |
| hypothetical protein | PviCFBP13507_00495 | Not Available | Positive | 112575 - 112910 | 12203.8 |
| hypothetical protein | PviCFBP13507_00500 | Not Available | Negative | 112925 - 113797 | 32908.1 |
| amp-binding protein | PviCFBP13507_00505 | Not Available | Negative | 113967 - 115640 | 61654.2 |
| glutamate carboxypeptidase | PviCFBP13507_00510 | Not Available | Positive | 115889 - 117130 | 43749.8 |
| two-component sensor histidine kinase | PviCFBP13507_00515 | Not Available | Negative | 117140 - 118315 | 43523.9 |
| dna-binding response regulator | PviCFBP13507_00520 | Not Available | Negative | 118321 - 119010 | 25598.1 |
| rnd transporter | PviCFBP13507_00525 | Not Available | Positive | 119109 - 120614 | 54579.0 |
| mipa/ompv family protein | PviCFBP13507_00530 | Not Available | Positive | 120611 - 121444 | 29631.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
