Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate adenylyltransferase subunit cysn | PviCFBP13507_06420 | Not Available | Positive | 1419637 - 1421535 | 69049.1 |
| duf1043 domain-containing protein | PviCFBP13507_06430 | Not Available | Negative | 1422856 - 1423290 | 16214.2 |
| alpha/beta hydrolase | PviCFBP13507_06435 | Not Available | Positive | 1423435 - 1424064 | 22733.3 |
| tryptophan--trna ligase | PviCFBP13507_06440 | Not Available | Positive | 1424092 - 1425441 | 49349.8 |
| cell division protein zape | PviCFBP13507_06445 | Not Available | Positive | 1425503 - 1426597 | 42172.7 |
| glxa family transcriptional regulator | PviCFBP13507_06450 | Not Available | Negative | 1426673 - 1427668 | 37885.1 |
| 50s ribosomal protein l13 | PviCFBP13507_06455 | Not Available | Positive | 1428063 - 1428491 | 15923.3 |
| 30s ribosomal protein s9 | PviCFBP13507_06460 | Not Available | Positive | 1428506 - 1428898 | 14603.7 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | PviCFBP13507_06465 | Not Available | Positive | 1429151 - 1429744 | 20817.0 |
| cytochrome b | PviCFBP13507_06470 | Not Available | Positive | 1429744 - 1430958 | 46022.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
