Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toluene tolerance protein | PviCFBP13507_06370 | Not Available | Positive | 1410213 - 1410866 | 23982.6 |
| stas domain-containing protein | PviCFBP13507_06375 | Not Available | Positive | 1410863 - 1411168 | 10737.1 |
| bola family transcriptional regulator | PviCFBP13507_06380 | Not Available | Positive | 1411282 - 1411521 | 8905.68 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | PviCFBP13507_06385 | Not Available | Positive | 1411544 - 1412809 | 44928.0 |
| atp phosphoribosyltransferase | PviCFBP13507_06390 | Not Available | Positive | 1412965 - 1413600 | 22964.3 |
| histidinol dehydrogenase | PviCFBP13507_06395 | Not Available | Positive | 1413725 - 1415071 | 48102.2 |
| histidinol-phosphate transaminase | PviCFBP13507_06400 | Not Available | Positive | 1415071 - 1416123 | 38837.4 |
| pdz domain-containing protein | PviCFBP13507_06405 | Not Available | Negative | 1416533 - 1417693 | 40912.6 |
| nif3-like dinuclear metal center hexameric protein | PviCFBP13507_06410 | Not Available | Positive | 1417804 - 1418562 | 27668.1 |
| sulfate adenylyltransferase subunit 2 | PviCFBP13507_06415 | Not Available | Positive | 1418707 - 1419624 | 35284.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
