Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | PviCFBP13507_06215 | Not Available | Negative | 1380964 - 1382415 | 51937.9 |
| asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit c | PviCFBP13507_06220 | Not Available | Negative | 1382430 - 1382717 | 10475.5 |
| rod shape-determining protein | PviCFBP13507_06225 | Not Available | Positive | 1382923 - 1383960 | 37005.8 |
| rod shape-determining protein mrec | PviCFBP13507_06230 | Not Available | Positive | 1384139 - 1385257 | 39899.3 |
| rod shape-determining protein mred | PviCFBP13507_06235 | Not Available | Positive | 1385250 - 1385741 | 18482.7 |
| septum formation inhibitor maf | PviCFBP13507_06240 | Not Available | Positive | 1385805 - 1386407 | 21105.3 |
| ribonuclease g | PviCFBP13507_06245 | Not Available | Positive | 1386404 - 1387861 | 54694.3 |
| tigr02099 family protein | PviCFBP13507_06250 | Not Available | Positive | 1388042 - 1391857 | 137278.0 |
| carbon-nitrogen hydrolase | PviCFBP13507_06255 | Not Available | Positive | 1391906 - 1392751 | 30370.1 |
| metalloprotease tldd | PviCFBP13507_06260 | Not Available | Positive | 1392754 - 1394193 | 50283.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
