Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein capi | PviCFBP13507_06160 | Not Available | Negative | 1367973 - 1368971 | 37527.8 |
| udp-glucose/gdp-mannose dehydrogenase family protein | PviCFBP13507_06165 | Not Available | Negative | 1368968 - 1370296 | 48423.9 |
| phosphoethanolamine transferase | PviCFBP13507_06170 | Not Available | Negative | 1370498 - 1372147 | 61710.5 |
| histidine phosphatase family protein | PviCFBP13507_06175 | Not Available | Positive | 1372583 - 1373140 | 19900.7 |
| class i sam-dependent methyltransferase | PviCFBP13507_06180 | Not Available | Negative | 1373313 - 1373993 | 25715.7 |
| dna-binding response regulator | PviCFBP13507_06185 | Not Available | Negative | 1374087 - 1374758 | 25196.4 |
| 4-carboxymuconolactone decarboxylase | PviCFBP13507_06195 | Not Available | Negative | 1377455 - 1377838 | 13910.5 |
| conjugal transfer protein trar | PviCFBP13507_06200 | Not Available | Negative | 1377878 - 1378909 | 36080.1 |
| septal ring lytic transglycosylase rlpa family protein | PviCFBP13507_06205 | Not Available | Negative | 1378963 - 1379334 | 13439.0 |
| asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit b | PviCFBP13507_06210 | Not Available | Negative | 1379508 - 1380953 | 53073.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
