Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein tolr | PviCFBP13507_00430 | Not Available | Positive | 97217 - 97663 | 16062.5 |
| energy transducer tonb | PviCFBP13507_00435 | Not Available | Positive | 97660 - 98499 | 30877.7 |
| methyl-accepting chemotaxis protein | PviCFBP13507_00445 | Not Available | Negative | 98933 - 100930 | 71254.9 |
| histidine kinase | PviCFBP13507_00450 | Not Available | Negative | 101076 - 102071 | 37117.1 |
| rna polymerase subunit sigma-24 | PviCFBP13507_00455 | Not Available | Negative | 102193 - 102705 | 18782.2 |
| nadp-dependent glyceraldehyde-3-phosphate dehydrogenase | PviCFBP13507_00460 | Not Available | Negative | 102861 - 104486 | 60005.2 |
| Trna-asn | Not Available | Not Available | Positive | 104660 - 104735 | Not Available |
| mfs transporter | PviCFBP13507_00470 | Not Available | Positive | 105457 - 106707 | 45767.8 |
| hypothetical protein | PviCFBP13507_00475 | Not Available | Positive | 106909 - 108270 | 47956.1 |
| tetr/acrr family transcriptional regulator | PviCFBP13507_00480 | Not Available | Positive | 108303 - 108953 | 24276.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
