Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase | PviCFBP13507_05760 | Not Available | Positive | 1290649 - 1291266 | 21736.7 |
| hypothetical protein | PviCFBP13507_05765 | Not Available | Negative | 1291346 - 1291588 | 9328.22 |
| hypothetical protein | PviCFBP13507_05770 | Not Available | Positive | 1291953 - 1292243 | 10253.1 |
| octaprenyl-diphosphate synthase | PviCFBP13507_05775 | Not Available | Negative | 1292326 - 1293294 | 34878.8 |
| 50s ribosomal protein l21 | PviCFBP13507_05780 | Not Available | Positive | 1293535 - 1293846 | 11503.1 |
| 50s ribosomal protein l27 | PviCFBP13507_05785 | Not Available | Positive | 1293880 - 1294155 | 9746.93 |
| obg family gtpase cgta | PviCFBP13507_05790 | Not Available | Positive | 1294372 - 1295595 | 44839.8 |
| glutamate 5-kinase | PviCFBP13507_05795 | Not Available | Positive | 1295686 - 1296804 | 39845.1 |
| hypothetical protein | PviCFBP13507_05800 | Not Available | Positive | 1296834 - 1297304 | 16976.7 |
| 30s ribosomal protein s20 | PviCFBP13507_05805 | Not Available | Negative | 1297521 - 1297799 | 10012.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
