Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent malic enzyme | PviCFBP13507_05655 | Not Available | Positive | 1268899 - 1270590 | 62129.9 |
| phosphoethanolamine transferase | PviCFBP13507_05660 | Not Available | Positive | 1270828 - 1272468 | 61034.1 |
| ribonuclease d | PviCFBP13507_05665 | Not Available | Positive | 1272611 - 1273744 | 42601.3 |
| hypothetical protein | PviCFBP13507_05670 | Not Available | Positive | 1273741 - 1274034 | 11380.8 |
| d-2-hydroxyacid dehydrogenase | PviCFBP13507_05675 | Not Available | Positive | 1274105 - 1275037 | 33994.9 |
| nitroreductase family protein | PviCFBP13507_05680 | Not Available | Negative | 1275177 - 1275770 | 21967.7 |
| ycgn family cysteine cluster protein | PviCFBP13507_05685 | Not Available | Positive | 1275981 - 1276430 | 17110.1 |
| duf2892 domain-containing protein | PviCFBP13507_05690 | Not Available | Negative | 1276435 - 1276815 | 13263.0 |
| 23s rrna methyltransferase | PviCFBP13507_05695 | Not Available | Negative | 1276893 - 1277393 | 18320.9 |
| copper resistance protein copb | PviCFBP13507_05700 | Not Available | Negative | 1277443 - 1278336 | 32315.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
